生物技术进展 ›› 2020, Vol. 10 ›› Issue (6): 704-710.DOI: 10.19586/j.2095-2341.2020.0069

• 检测与应用 • 上一篇    下一篇

普通牛及其近缘种特异性序列筛选及环介导等温扩增检测方法

瞿展,贾犇,杨立桃*   

  1. 上海交通大学生命科学技术学院, 上海 200240
  • 收稿日期:2020-05-26 出版日期:2020-11-25 发布日期:2020-07-21
  • 通讯作者: 杨立桃 E-mail:yylltt@sjtu.edu.cn
  • 作者简介:瞿展 E-mail:quzhan1055@163.com
  • 基金资助:
    国家转基因生物新品种培育重大专项(2016ZX08012005)。

Loop-mediated Isothermal Amplification Method for Detection of Bovine-related Species Based on the Specific DNA Sequence

QU Zhan, JIA Ben, YANG Litao   

  1. School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
  • Received:2020-05-26 Online:2020-11-25 Published:2020-07-21

摘要: 近年来,肉制品掺假事件频频发生,亟需建立快速、可靠的肉制品动物源性成分检测方法,保障肉类食品安全。与常规PCR等检测方法相比,环介导等温扩增(loop-mediated isothermal amplification,LAMP)方法具有高特异性、高灵敏度、反应快、易操作等优势。基于此,利用生物信息算法筛选普通牛及其近缘种(牦牛、水牛、美洲野牛)的全基因组序列,以获得种间相似性序列,进而建立并优化可用于检测普通牛及其近缘种成分的特异性LAMP方法。最终优化后的LAMP反应体系为:10 μmol·L-1外引物F3和B3各0.25 μL,10 μmol·L-1内引物FIP和BIP各2 μL,2 mmol·L-1 dNTP 2.5 μL,25 mmol·L-1 MgSO4 4 μL,5 mol·L-1 甜菜碱 3.5 μL,8.0 U·μL-1 Bst DNA 聚合酶 1 μL,10×ThermoPol Buffer 2.5 μL,DNA模板2 μL,加双蒸水至25 μL;LAMP反应条件为:65 ℃恒温扩增1 h,80 ℃ 10 min。在扩增产物中加入SYBR GreenⅠ荧光染料后,检测结果可用肉眼直接观察。优化后的LAMP方法在1 h内能特异性地检测出普通牛、牦牛、水牛及美洲野牛成分,检测灵敏度达到0.020 ng·μL-1,且可特异性地检测出市售肉制品中含有牛肉成分的样品。研究所建立的LAMP方法具有高特异性、高灵敏度、反应快速、操作简便和无需精密仪器等特点,可应用于肉制品中普通牛及其近缘种成分的实际检测,为我国肉类食品安全提供了有力保障。

关键词: 环介导等温扩增, 牛近缘种, 检测方法

Abstract: In recent years, adulteration of meat products frequently occurs,  it is urgent to establish a rapid and reliable detection method for animal-derived components in meat products to ensure the safety of meat products. Compared with conventional PCR and other detection methods, loop-mediated isothermal amplification (LAMP) method has the advantages of high specificity, high sensitivity, quick reaction and easy operation. Based on this, the whole genome sequences of common cattle and their related species (yak, buffalo, bison) were screened by bioinformatics algorithm to obtain the similarity sequences among species, and then the specific LAMP method for detecting the components of common cattle and their related species was established and optimized. The final optimized LAMP reaction system was as follows: 0.25 μL of 10 μmol·L-1 outer primers F3 and B3, 2 μL of 10 μmol·L-1 inner primers FIP and BIP, 2.5 μL of 2 mmol·L-1 dNTP, 4 μL of 25 mmol·L-1 MgSO4, 3.5 μL of 5 mol·L-1 betaine, 1 μL of 8.0 U·μL-1 Bst DNA polymerase, 2.5 μL of 10×ThermoPol Buffer, 2 μL of DNA template, and adding double distilled water to 25 μL. The reaction conditions of LAMP were: amplification at 65 ℃ for 1 h and then amplification at 80 ℃ for 10 min. After adding SYBR GreenⅠfluorescent dye into the amplification product, the detection results could be directly observed by naked eyes. The optimized LAMP method could specifically detect the components of common cattle, yak, buffalo and bison within 1 h, with a detection sensitivity of 0.020 ng·μL-1, and could specifically detect the samples containing beef components in meat products on the market. The LAMP method established in this study had the characteristics of high specificity, high sensitivity, quick response, simple operation and no need of precision instruments, which could be applied to the actual detection of common cattle and their related species in meat products, and provide a strong guarantee for the safety of meat products in China.

Key words: loop-mediated isothermal amplification, bovine-derived materials, detection method