生物技术进展 ›› 2019, Vol. 9 ›› Issue (4): 375-383.DOI: 10.19586/j.2095-2341.2019.0018

• 研究论文 • 上一篇    下一篇

吉陶单极虫可分泌蛋白酶基因的克隆与生物信息学分析

张凤丽1,杨雅麟1*,夏锐1,高辰辰1,李栋1,冉超1,张震2,张洪玲2,周志刚2*   

  1. 1.中国农业科学院饲料研究所, 农业农村部饲料生物技术重点实验室, 北京 100081;
    2.中国农业科学院饲料研究所, 中国-挪威鱼类消化道微生物联合实验室, 北京 100081
  • 收稿日期:2019-02-25 出版日期:2019-07-25 发布日期:2019-04-02
  • 通讯作者: 杨雅麟,副研究员,博士,研究方向水产生物技术。E-mail:yangyalin@caas.cn;周志刚,研究员,博士,研究方向水产动物消化道微生物学。E-mail:zhouzhigang03@caas.cn
  • 作者简介:张凤丽,硕士研究生,研究方向水产动物营养与饲料科学。E-mail:15737928313@163.com。
  • 基金资助:
    国家自然科学基金项目(31672294);现代农业产业技术体系项目(SCGWZJ20181104-04);陕西省创新能力支撑计划项目(2018TD-021);中国富硒产业研究院富硒专项科技计划重点项目(2018FXZX02-04)资助。

Gene Cloning and Bioinformatics Analysis of Secret Protease Gene from Thelohanellus kitauei

ZHANG Fengli, YANG Yalin, XIA Rui, GAO Chenchen, LI Dong, RAN Chao, ZHANG Zhen, ZHANG Hongling, ZHOU Zhigang   

  1. 1.Key Laboratory of Feed Biotechnology, Ministry of Agriculture and Rural Affairs, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China;
    2.Sino-Norway Joint Lab on Fish Gut Microbiota, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China
  • Received:2019-02-25 Online:2019-07-25 Published:2019-04-02

摘要: 粘孢子虫为鱼类主要的寄生虫,给渔业的生产造成严重的危害。近年来,粘孢子虫的蛋白酶以及抑制剂在入侵和感染宿主中的作用被越来越多的报道。在前期粘孢子虫吉陶单极虫转录组数据的基础上,成功克隆了3个可分泌蛋白酶基因: TK Papain-1、TK Papain-2和TK Pepsin,并且通过异源表达得到了与预测蛋白大小相符的蛋白。通过生物信息学的分析发现,TK Papain-1、TK Papain-2属于Papain (C1A)家族成员,均编码半胱氨酸蛋白酶,分别编码150个和322个氨基酸,蛋白大小为17.06 kDa和36.7 kDa;TK Pepsin编码天冬氨酸蛋白酶,编码491个氨基酸,编码蛋白理论大小为55.41 kDa。3个可分泌蛋白酶均有信号肽序列,为可分泌蛋白;通过进化树的构建,发现与海葵、水螅、纤毛虫同源序列亲缘关系较近。通过多序列比对,找到了可分泌蛋白酶的保守位点。研究结果为进一步深入粘孢子虫蛋白酶性质及感染机制方面的研究提供了基础。

关键词: 粘孢子虫, 蛋白酶, 生物信息学分析, 克隆, 表达

Abstract: Myxosporea are the common parasites of fish, which causing serious loss in fish production. The role of Myxosporea proteases and inhibitors in affecting their invasion and infection is increasingly reported. Based on the early transcriptome data of Myxosporea Thelohanellus kitauei, three highly expressed secret protease genes, TK Papain-1, TK Papain-2 and TK Pepsin, were successfully cloned. Using bioinformatics analysis, TK Papain-1 and TK Papain-2 are member of the papain (C1A) family, which encodes cysteine proteases. These two protease genes encoding 150 and 322 amino acids and the protein sizes are 17.06 kDa and 36.7 kDa respectively. TK pepsin encodes aspartic proteases. This gene encodes a total of 491 amino acids and the protein size is 55.41 kDa. All the proteases have signal peptide sequences, which are secret protease; through the construction of phylogenetic trees, we found that the amino acid sequence of those proteases were similar with homologous sequences of Nematostella vectensis, Hydra vulgar and Pseudocohnilembus persalinus. Moreover, using multiple sequence alignment, the conserved sites of those secretors of protease and the protein corresponding to the predicted size was obtained by heterologous expression. This study provided a basis for further research on the Myxosporium protease properties, and infection mechanism.

Key words: Myxosporea, protease, bioinformatics analysis, gene clone, expression